Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938824.1_cds_XP_016483577.1_74680
CDS Infomation

[gene=LOC107804239] [db_xref=GeneID:107804239] [protein=probable methyltransferase PMT24] [protein_id=XP_016483577.1] [location=join(65328..66227,66313..66462,71651..71921,72002..72112,72201..72375,72933..73205,73910..74104,74193..74421)] [gbkey=CDS]
Sequence

ATGGCTGGGGGAAGTAGCTCCCATTTTGGTGGCAGGAAATCATCCGATTGCTGTTCAAAA
ATCAATGTTGTGACTTCTCTTGGAATTTCTTTAGTTGGGATATGGATGCTGATGGCATTA
TTTAGTATGCCTCTTGTAAACTCAGAGATATCTTCAACATTGAAAGTAACCAAGAAACTT
TCGGGGCAGTATACAGGCATTTCTGGCGATTTTACAGTCAATGCAAAGAGAGAAGAGGAT
GTAACATTCCAGGGGGAGAAGGGGTTTAGAAGGGGAAGGTCTATGGAGGAGTTTTCAGAT
GAAAAAGGGCTGGATAGTTACCAAAATGAGGAAAGGGAAGGAGAAAACTCTAATTTAAGT
AATGGAGAAGAAAATCAAGAAGATTCTGGATCCACTGATGAATCACAGTCTAGCGGTGAG
AGTTCAAATCTAGAGAGCGAGGAAGTAGATTCGAGAGAGAAAGGCTCAACTTCTACCAGT
GGCGAGTCAGATAATGGAGGTGAAGACTCAAATCCAGATGGTGCCGAGACAACAGCAGAA
GATGAGAACATTGTCTTAAAGTCAAAAAAGGGAGAGGAAGAGAATGAGATTTTCCCAGCT
GGAGATCAATCAGAGATTTTAAAAGAAACTACTACACAAAATGGGCCATGGTCAACTCAG
GCTGCTGAGTCTAAAAAGGAGAATGAGTCACAGGATTCACCAAAGTGGAAGACATGTAAA
ACTGATGCTGGACCAGATTATATTCCTTGCCTGGATAATGTGCAAGCTATAAGGAAGCTC
CCAAGTACCTCGCACTATGAACATCGTGAGAGGCACTGCCCTATTGAAGCTTCAACTTGC
CTTGTTCCTTTGCCTTCAGGATACAAGCAGCCAATTGGATGGCCTAGGAGCAGAGAGCAG
ATATGGTACTCTAATGTTCCTCATGGAAAGCTAGCCAAGGTCAAGGGGCACCAAAACTGG
GTCAAAGTTACTGGAGAGTACCTTACTTTCCCTGGTGGAGGTACTCAGTTTAAGCAAGGT
GCTCTTCATTACATAGATTTCCTCCAGAAGTCCCTGCCTCAAATTTCATGGGGAAAACAA
ACACGTGTTATTTTGGATGTTGGGTGTGGAGTGGCCAGCTTTGGAGGATACCTCTTTGAA
AGAGATGTACTAGCAATGTCACTTGCCCCCAAGGATGAGCACGAAGCCCAAGTACAATTT
GCACTTGAAAGGGGCATCCCTGCTATATCAGCTGTTATGGGAACTAAACGACTACCATTC
CCCAGTAAAGTGTTTGATGCTGTCCATTGTGCACGTTGTAGAGTTCCATGGCATATTGAA
GGTGGCAAACTTCTCCTAGAATTGAATCGTGTCTTGCGGCCCGGTGGTCACTTCCTTTGG
TCTGCTACACCAGTATATCGGAAGGATGAAGAAAGTGTTGGAATTTGGGAAGCTATGTCT
GAACTAACTAAATCAATGTGCTGGGAACTAGTGGAAATCAATGAAGATAAGCTAAATGAA
GTAGGTGTAGCTATATTCAGAAAGCCAACTTCAAATGATTGCTACCAGAGTAGAACACAA
AATGACCCACCTATGTGTGAAGAAGCTGATGATCCAGATGCAGCCTGGAATATAACACTT
GAGGCATGTATGCACAAAGCGCCAGCAGATGCATCTGAACGTGGTTCAAGGTGGCCGTCA
AAATGGCCATTGAGGTCAGAGAAGCTTCCTTATTGGTTGACAAGTTCTCAAGTTGGAGTT
TATGGAAAAGCAGCCCCAGCAGACTTTGCTGCAGACAATGATCATTGGAAACACGTTGTG
TCAAAATCGTATTTAAATGGTCTTGGCATTAACTGGTCTTCAGTAAGGAATGTCATGGAT
ATGAAAGCTGTTTATGGAGGATTTGCTGCAGCACTGAAAGACTTGAAAGTCTGGGTTATG
AATGTAGTTCCAATTGACTCGCCTGATACACTTCCAATTATATATGAACGCGGCTTCTTT
GGCATTTACCATGACTGGTGTGAATCCTTCAGCACGTATCCCAGATCTTATGATCTTCTT
CACGCAGATCATCTTTTCTCCGATATTAAGAAAAGGTGCAAGATAGTACCAGTATTTGCA
GAAGTGGACAGGATTCTGAGGCCAGAAGGAAAGTTGATTGTGCGGGACAATGCTGAAACT
ATACTTGAAATAGAGAATATGGCTAGGTCAGCAAAATGGAAAGTGAAGATGTCTTACTCA
AAGGATGGTGAAGGATTGCTATTTGTTCAAAAATCATTTTGGCGTCCAAAACAAGAACAG
ATAATCAAGTCAGCCATTGCATAG

Peptide Sequence

PEP ID

XP_016483577.1
PEP Infomation

PREDICTED: probable methyltransferase PMT24 [Nicotiana tabacum]
Sequence

MAGGSSSHFGGRKSSDCCSKINVVTSLGISLVGIWMLMALFSMPLVNSEISSTLKVTKKL
SGQYTGISGDFTVNAKREEDVTFQGEKGFRRGRSMEEFSDEKGLDSYQNEEREGENSNLS
NGEENQEDSGSTDESQSSGESSNLESEEVDSREKGSTSTSGESDNGGEDSNPDGAETTAE
DENIVLKSKKGEEENEIFPAGDQSEILKETTTQNGPWSTQAAESKKENESQDSPKWKTCK
TDAGPDYIPCLDNVQAIRKLPSTSHYEHRERHCPIEASTCLVPLPSGYKQPIGWPRSREQ
IWYSNVPHGKLAKVKGHQNWVKVTGEYLTFPGGGTQFKQGALHYIDFLQKSLPQISWGKQ
TRVILDVGCGVASFGGYLFERDVLAMSLAPKDEHEAQVQFALERGIPAISAVMGTKRLPF
PSKVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGHFLWSATPVYRKDEESVGIWEAMS
ELTKSMCWELVEINEDKLNEVGVAIFRKPTSNDCYQSRTQNDPPMCEEADDPDAAWNITL
EACMHKAPADASERGSRWPSKWPLRSEKLPYWLTSSQVGVYGKAAPADFAADNDHWKHVV
SKSYLNGLGINWSSVRNVMDMKAVYGGFAAALKDLKVWVMNVVPIDSPDTLPIIYERGFF
GIYHDWCESFSTYPRSYDLLHADHLFSDIKKRCKIVPVFAEVDRILRPEGKLIVRDNAET
ILEIENMARSAKWKVKMSYSKDGEGLLFVQKSFWRPKQEQIIKSAIA

Transcript Sequence

Gene sequence data has not been registered.